Note: If you have trouble accessing any of my articles for whatever reason, then just contact me and I will get you sorted out.
| Title & Authors | Year | Journal |
|---|---|---|
|
The Literary Theme Ontology for Media Annotation and Information Retrieval
[ arXiv link ]
Paul Sheridan, M. Onsjö, J. Hastings |
2019 | Under review |
|
A Knowledge-based Filtering Story Recommender System for Theme Lovers with an Application to the Star Trek Television Franchise
[ arXiv link ]
Paul Sheridan, M. Onsjö, S. Jimenez, G. Dueñas |
2018 | Under review |
|
A Novel ASXL1-OGT Axis Plays Roles in H3K4 Methylation and Tumor Suppression in Myeloid Malignancies
[ link ]
D. Inoue, T. Fujino, Paul Sheridan, Y. Zhang, R. Nagase, S. Horikawa, Z. Li, H. Matsui, A. Kanai, M. Saika, R. Yamaguchi, H. Kozuka-Hata, K. Kawabata, A. Yokoyama, S. Goyama, T. Inaba, S. Imoto, S. Miyano, M. Xu, F. Yang, M. Oyama, T. Kitamura |
2018 | Leukemia |
|
A Preferential Attachment Paradox: How Preferential Attachment Combines with Growth to Produce Networks with Log-normal In-degree Distributions
[ link ]
Paul Sheridan, T. Onodera |
2018 | Scientific Reports |
|
Large-scale DNA Barcode Library Generation for Biomolecule Identification in High-throughput Screens
[ link ]
E. Lyons, Paul Sheridan, G. Tremmel, S. Miyano, S. Sugano |
2017 | Scientific Reports |
|
Theme Enrichment Analysis: A Statistical Test for Identifying Significantly Enriched Themes in a List of Stories with an Application to the Star Trek Television Franchise
[ arXiv link ]
M. Onsjö, Paul Sheridan |
2017 | Under review |
|
PAFit: An R Package for Modeling and Estimating Preferential Attachment and Node Fitness in Temporal Complex Networks
[ arXiv link ]
T. Pham, Paul Sheridan, H. Shimodaira |
2017 | Under review |
|
Joint Estimation of Preferential Attachment and Node Fitness in Growing Complex Networks
[ link ]
T. Pham, Paul Sheridan, H. Shimodaira |
2016 | Scientific Reports |
|
Identification of RNA-Binding Protein LARP4B as a Tumor Suppressor in Glioma
[ link ]
H. Koso, H. Yi, Paul Sheridan, S. Miyano, Y. Ino, T. Todo, S. Watanabe |
2016 | Cancer Research |
|
PAFit: A Statistical Method for Measuring Preferential Attachment in Temporal Complex Networks
[ link ]
T. Pham, Paul Sheridan, H. Shimodaira |
2015 | PLoS ONE |
|
The AURKA/TPX2 axis drives colon tumorigenesis cooperatively with MYC
[ link ] Y. Takahashi, Paul Sheridan, A. Niida, G. Sawada, R. Uchi, H. Mizuno, J. Kurashige, K. Sugimachi, S. Sasaki, Y. Shimada, K. Hase, M. Kusunoki, S. Kudo, M. Watanabe, K. Yamada, K. Sugihara, H. Yamamoto, A. Suzuki, Y. Doki, S. Miyano, M. Mori, K. Mimori |
2015 | Annals of Oncology |
|
Anemia Amelioration by Lactose Infusion During Trypanosomosis Could be Associated with Erythrocytes Membrane De-galactosylation
[ link ] E.O. Balogun, J.B. Balogun, S. Yusuf, H.M. Inuwa, I.S. Ndams, Paul Sheridan, D.K. Inaoka, T. Shiba, S. Harada, K. Kita, K.A.N. Esievo, A.J. Nok |
2014 | Veterinary Parasitology |
|
Measuring preferential attachment in growing networks with missing-timeline using Markov chain Monte Carlo
[ link ] Paul Sheridan, Y. Yagahara, H. Shimodaira |
2012 | Physica A |
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A scale-free structure prior for graphical models with applications in functional genomics
[ link ] Paul Sheridan, T. Kamimura, H. Shimodaira |
2010 | PLoS ONE |
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A preferential attachment model with Poisson growth for scale-free networks
[ link ] Paul Sheridan, Y. Yagahara, H. Shimodaira |
2008 | Annals of the Institute of Statistical Mathematics |
| Title & Authors | Year | Venue |
|---|---|---|
|
Nonparametric estimation of the preferential attachment function in complex networks: evidence of deviations from log linearity
[ link ]
T. Pham, Paul Sheridan, H. Shimodaira |
2015 | European Conference on Complex Systems (ECCS'14) |
|
On scale-free priors and their applicability in large-scale network inference with graphical models
[ link ] Paul Sheridan, T. Kamimura, H. Shimodaira |
2009 | The First International Conference on Complex Sciences: Theory and Applications (Complex'2009) |
| Title & Authors | Year | Venue |
|---|---|---|
|
Maximum likelihood estimation of preferential attachment in growing networks
[ pdf ]
T. Onodera, Paul Sheridan |
2014 | Topologica |